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View Structure Prediction Details

Protein: FRO6_ARATH
Organism: Arabidopsis thaliana
Length: 738 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRO6_ARATH.

Description E-value Query
Range
Subject
Range
FRO7_ARATH - Ferric reduction oxidase 7, chloroplastic OS=Arabidopsis thaliana GN=FRO7 PE=2 SV=1
587.0 [0..1] [738..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDYETPLLS KDSSSSSSVI TSSLKWILKV VMSMIFVTWV VFLMMMYPEQ LGDDFLTFVS  60
   61 SKTFLGTTGT MFLIFSCPIL VISVLASLYL IISGEDKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTKKKISKFP RFRLWTFPVL VDGPFGVVSA AEFLGIMVFS VFFLWSIYAY TLRNLDLLER  60
   61 FHVLPKNRSI LLLEVTGLRL GMIGLLCMVF LFLPISRGSI LLRLIDIPFE HATRYHVWLG 120
  121 HITMAFFSLH GLCYVVGWII QGQLLELIFS WNAIGIAILP GVISLVAGLL MWVTSLHTVR 180
  181 KNYFELFFYT HQLYIVFIVF LALHVGDYMF SI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.337242
Match: PF01794.10
Description: No description for PF01794.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [311-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAGGIFLFIL DRFLRFCQSR RTVDVISAKS LPCGTLELVL SKPPNMRYNA LSFIFLQVRE  60
   61 LSWLQWHPFS VSSSPLDGNH HVAVLIKVLG GWTAKLRDQL SNLYEAENQD QLISPQSYPK 120
  121 ITTCVEGPYG HESPYHLAYE NLVLVAGGIG ITPFFAILSD ILHRKRDGKA CLPSKVLVVW 180
  181 AIKNSDELSL LSAIDIPSIC PFFSKKLNLE IHIYITRQSE PRLEDGMVHK VVHPSVKLPR 240
  241 TNGCSMSVLV GTGDNIWSGL YLIISTIGFI SMITLLDIFY IKRYNITTWW YK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.923682288946602 bayes_pls_golite062009
oxidoreductase activity 0.6192827046908 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [603-738]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLFVGCMVA SVLIFGGLVV VFWHRWEHKT GEVEANGNDK VDLNGEETHN PSAAELKGLA  60
   61 IEEDVQNYTT IRYGTRPAFR EIFESLNGKW GSVDVGVIVC GPATLQTTVA KEIRSHSIWR 120
  121 SANHPLFHFN SHSFDL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.26
Match: 2ok7A
Description: No description for 2ok7A was found.

YRC Informatics Platform - Version 3.0
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