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View Structure Prediction Details

Protein: gi|110737096, gi...
Organism: Arabidopsis thaliana
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110737096, gi....

Description E-value Query
Range
Subject
Range
gi|21592749 - gi|21592749|gb|AAM64698.1| putative thaumatin-like protein [Arabidopsis thaliana]
456.0 [0..1] [345..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNLSSRRAS STLTLSFTVL LLASTGSYGS TFTFANRCGY TVWPGILSNA GSPTLSTTGF  60
   61 ELPKGTSRSL QAPTGWSGRF WARTGCKFDS SGSGTCKTGD CGSNAVECAG LGAAPPVTLA 120
  121 EFTLGTGGDD FYDVSLVDGY NIPMIVEVAG GSGQCASTGC TTDLNIQCPA ELRFGDGDAC 180
  181 KSACLAFRSP EYCCSGAYAT PSSCRPSVYS EMFKAACPRS YSYAYDDATS TFTCAGGDYT 240
  241 VTFCP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.221849
Match: 2ahnA
Description: No description for 2ahnA was found.

Predicted Domain #2
Region A:
Residues: [246-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSPSQKSTSY SPPVTDSSST SQGSDPVPGS DTGYAGQGQQ TPGQGNVYGS QGTGSEMGTG  60
   61 ETMLQDGSWM AGLAMGEASR PAGVSLTVLL AAFTFPFIFS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle