| Protein: | gi|20465741, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465741, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
424.0 | [0..1] | [602..1] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MVSHRMEDSG KKIRVSLLWK GNKYSVEIDS GASLKDLGYE LRKLTGVTSE TLRLIVPRLN 60
61 EKGSSLMLPF SDEHSSLSLQ ESNIIEDKTI RMMGVSEEEV EGVLKEAVSD MRILGFEEEE 120
121 RRLKQ
|
| Detection Method: |  |
| Confidence: | 25.045757 |
| Match: | 2ojrA |
| Description: | No description for 2ojrA was found. |
|
Region A: Residues: [126-335] |
1 11 21 31 41 51
| | | | | |
1 KKSYVSSASI KLPQGTYIFG DFRTLQLPGI ELNPPPSAAL KRMHMLAADP GIIAVMNKHR 60
61 WRVGIMTELA PVGYVGVSPR CLLGFNKNQG EEISLRLRTD DLKGFRKYQS IKKTLLHELA 120
121 HMVYTEHDEK FYALDSQLNK EAESLDWTKS RGHTLNGTKF INDDDEEDYF FDENETVSQR 180
181 LGGNQSDNLG NARESSVAAA YRRLSHTSVS
|
| Detection Method: | |
| Confidence: | 69.102373 |
| Match: | PF08325.1 |
| Description: | No description for PF08325.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [336-486] |
1 11 21 31 41 51
| | | | | |
1 KLSEEPDPDD LVDVRDENKQ LVLPKAQSDS MTKFEPDPDD TTADDATKTE SCHSYEMASD 60
61 LAHPTKDDDE PDPDDSETHT SIGEVENMKI VNDTVMLCGN LNADEATQAT PEPNNAEPYP 120
121 DYNLVVTERE TIMEVDEPDP DDQEIQRIQD S
|
| Detection Method: | |
| Confidence: | 1.33 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [487-603] |
1 11 21 31 41 51
| | | | | |
1 VTIISNRLKK AIKALRNEVS PGQATTVLQM LLKIVRNIIE QPNEMKFKRL RKGNPAIKRN 60
61 ILNFPAAVEI LSVVGFVDEM VSESTGAQEP YLVLKRNDPG LLWIAKSMIE ESHPTGS
|
| Detection Method: | |
| Confidence: | 16.154902 |
| Match: | 2ccqA |
| Description: | No description for 2ccqA was found. |
