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View Structure Prediction Details

Protein: B3GTA_ARATH
Organism: Arabidopsis thaliana
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GTA_ARATH.

Description E-value Query
Range
Subject
Range
gi|21360399, gi|... - pir||A86186 hypothetical protein [imported] - Arabidopsis thaliana, gi|2388580|gb|AAB71461.1| Simil...
251.0 [0..8] [345..1]
gi|125582562, gi... - gi|50909623|ref|XP_466300.1| putative avr9 elicitor response protein [Oryza sativa (japonica cultiva...
gi|125539950 - gi|125539950|gb|EAY86345.1| hypothetical protein OsI_07722 [Oryza sativa Indica Group]
241.0 [0..14] [345..6]
gi|109520331 - gi|109520331|ref|XP_001081910.1| PREDICTED: similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosami...
239.0 [0..44] [338..60]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL  60
   61 KMNYDQRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.840 a.23.7 Description not found.

Predicted Domain #2
Region A:
Residues: [69-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVLTVEDKLV VLGCKDLERR IVETEMELAQ AKSQGYLKKQ KSVSSSGKKM LAVIGVYTGF  60
   61 GSHLKRNKFR GSWMPRDDAL KKLEERGVVI RFVIGRSANR GDSLDRKIDE ENRATKDFLI 120
  121 LENHEEAQEE LPKKVKFFYS AAVQNWDAEF YVKVDDNVDL DLEGMIALLE SRRSQDGAYI 180
  181 GCMKSGDVIT EEGSQWYEPE WWKFGDDKSY FRHATGSLVI LSKNLAQYVN INSGLLKTYA 240
  241 FDDTTIGSWM IGVQATYIDD NRLCCSSTRQ EKVCSMA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.154902
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle