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View Structure Prediction Details

Protein: GDL65_ARATH
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL65_ARATH.

Description E-value Query
Range
Subject
Range
gi|2832625, gi|7... - pir||T05034 hypothetical protein F13C5.140 - Arabidopsis thaliana, gi|7268691|emb|CAB78899.1| putati...
350.0 [0..1] [361..266]

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Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVCVMMMA MAIAMAMNIA MGDPIAPCYF IFGDSLVDSG NNNRLTSLAR ANYFPYGIDF  60
   61 QYGPTGRFSN GKTTVDVITE LLGFDDYITP YSEARGEDIL RGVNYASAAA GIREETGRQL 120
  121 GARITFAGQV ANHVNTVSQV VNILGDENEA ANYLSKCIYS IGLGSNDYLN NYFMPVYYST 180
  181 GSQYSPDAYA NDLINRYTEQ LRIMYNNGAR KFALVGIGAI GCSPNELAQN SRDGVTCDER 240
  241 INSANRIFNS KLVSLVDHFN QNTPGAKFTY INAYGIFQDM VANPSRYGFR VTNAGCCGVG 300
  301 RNNGQITCLP GQAPCLNRDE YVFWDAFHPG EAANVVIGSR SFQRESASDA HPYDIQQLAR 360
  361 L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle