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View Structure Prediction Details

Protein: ALN_ARATH
Organism: Arabidopsis thaliana
Length: 506 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALN_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555036 - gi|21555036|gb|AAM63760.1| unknown [Arabidopsis thaliana]
340.0 [0..1] [506..1]

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Predicted Domain #1
Region A:
Residues: [1-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS  60
   61 GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG LIDVHVHLDD PGRSEWEGFP 120
  121 SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS 180
  181 SALESLLDAG VLGLKSFMCP SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI 240
  241 EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL 300
  301 DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI 360
  361 DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW SYGKKYGVTL EQVTSWWSDR 420
  421 PSKLAGLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST 480
  481 FVRGNLVFGE GKHASDACGS LQLATT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.522879
Match: 1k1dA
Description: D-hydantoinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
dihydropyrimidinase activity 5.22180471926674 bayes_pls_golite062009
allantoinase activity 2.45571277189844 bayes_pls_golite062009
dihydroorotase activity 2.32070383330692 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 2.20489529944693 bayes_pls_golite062009
hydrolase activity 2.17584977880576 bayes_pls_golite062009
deaminase activity 1.79186203771221 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.60895003474033 bayes_pls_golite062009
adenine deaminase activity 1.00917389012319 bayes_pls_golite062009
binding 0.778600467259354 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.573107361273483 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle