| Protein: | CAAT9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..6] | [561..939] |
|
Region A: Residues: [1-495] |
1 11 21 31 41 51
| | | | | |
1 MGGHEGFSNQ RLSSATWFSH FRASALRSKS LPPPSSQTAV RSTSGDSLVR RLGLFDLILL 60
61 GVGASIGAGV FVVTGTVARD AGPGVTISFL LAGASCVLNA LCYAELSSRF PAVVGGAYMY 120
121 SYSAFNEITA FLVFVQLMLD YHIGAASISR SLASYAVALL ELFPALKGSI PLWMGSGKEL 180
181 LGGLLSLNIL APILLALLTL VLCQGVRESS AVNSVMTATK VVIVLVVICA GAFEIDVANW 240
241 SPFAPNGFKA VLTGATVVFF SYVGFDAVAN SAEESKNPQR DLPIGIMGSL LVCISLYIGV 300
301 CLVLTGMVPF SLLSEDAPLA EAFSSKGMKF VSILISIGAV AGLTTTLLVG LYVQSRLYLG 360
361 LGRDGLLPSI FSRIHPTLHT PLHSQIWCGI VAGVLAGIFN VHSLSHILSV GTLTGYSVVA 420
421 ACVVALRLND KKDRESSNRW TSSWQEGVIC LVIIACSGFG AGVFYRFSAS VIFILLSVGV 480
481 AVVASAVLHY RQAYA
|
| Detection Method: |  |
| Confidence: | 1.32 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [496-569] |
1 11 21 31 41 51
| | | | | |
1 LPLGSGFSCP GVPIVPSVCI FFNIFLFAQL HYEAWIRFVV VSVLATAVYA LYGQYHADPS 60
61 MLDYQRAPET ESDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
