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View Structure Prediction Details

Protein: GUX8_ARATH
Organism: Arabidopsis thaliana
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUX8_ARATH.

Description E-value Query
Range
Subject
Range
gi|31433449, gi|... - gi|37536746|ref|NP_922675.1| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|31433...
474.0 [0..51] [497..44]

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Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE  60
   61 HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV VIASLDVPLR WVQTLEEEDG 120
  121 AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC 180
  181 GRFCAVFINP CIFHTGLFVL QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP 240
  241 LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW 300
  301 PVLPLGFSWH EQRRATIGYS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [321-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF  60
   61 PFFTIPHTIH PL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [393-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGWSLYLMAS FALSSISINT LLLPTLPVLT PWLGILGTLL VMAFPWYPDG VVRALSVFAY  60
   61 AFCCAPFVWV SFRKITSHLQ VLIEKEVLFP RLGDSGVTSG FSKLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle