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View Structure Prediction Details

Protein: gi|17528968, gi|...
Organism: Arabidopsis thaliana
Length: 63 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17528968, gi|....

Description E-value Query
Range
Subject
Range
gi|115441727, gi... - gi|56785117|dbj|BAD82755.1| unknown protein [Oryza sativa Japonica Group], gi|50902308|ref|XP_463587...
gi|149390879, gi... - gi|149390879|gb|ABR25457.1| unknown [Oryza sativa (indica cultivar-group)], gi|125528781|gb|EAY76895...
91.0 [0..1] [60..1]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVLTYFGM TLAAFAFWQS MDKVHVWIAL HQDEKQERME KEAEVRRVRA ELLRKAREED  60
   61 PLA

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.795 a.7.14 Description not found.
View Download 0.627 a.7.17 Description not found.
View Download 0.624 a.60.1 SAM/Pointed domain
View Download 0.571 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.553 a.60.1 SAM/Pointed domain
View Download 0.520 a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.512 a.3.1 Cytochrome c
View Download 0.510 a.7.17 Description not found.
View Download 0.508 a.60.4 DNA repair protein Rad51, N-terminal domain
View Download 0.506 a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.411 a.4.5 "Winged helix" DNA-binding domain
View Download 0.364 a.4.5 "Winged helix" DNA-binding domain
View Download 0.311 a.4.1 Homeodomain-like
View Download 0.291 a.159.4 Description not found.
View Download 0.242 a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle