| Protein: | CAF1M_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 405 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF1M_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
391.0 | [0..1] | [343..1] |
|
|
382.0 | [0..7] | [388..4] |
|
|
377.0 | [0..7] | [397..4] |
|
|
367.0 | [0..27] | [402..19] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MFLIRLSRHN PSSFTLLTRR LHDQTISSSR LRDLYNFQSP PPLSSSASEN PDFNQKNNNK 60
61 KKPKPQYRPP SSLEGVKTVH SDLPFDFRFS YTESCSNVRP IGLREPKYSP FGPDRLDREW 120
121 TGVCAPAVNP KVESVDGVED PKLEE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [146-265] |
1 11 21 31 41 51
| | | | | |
1 KRRKVREKIQ GASLTEAERK FLVELCQRNK TKRQVNLGRD GLTHNMLNDV YNHWKHAEAV 60
61 RVKCLGVPTL DMKNVIFHLE DKTFGQVVSK HSGTLVLYRG RNYDPKKRPK IPLMLWKPHE 120
121
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [266-405] |
1 11 21 31 41 51
| | | | | |
1 PVYPRLIKTT IDGLSIDETK AMRKKGLAVP ALTKLAKNGY YGSLVPMVRD AFLVSELVRI 60
61 DCLGLERKDY KKIGAKLRDL VPCILVTFDK EQVVIWRGKD YKPPKEDDEY SSFIHRESSI 120
121 DSDVDLSCSR GAQDSPDETT
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 1ln4A |
| Description: | hypothetical protein YhbY |
Matching Structure (courtesy of the PDB): |
|
