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View Structure Prediction Details

Protein: gi|20465379, gi|...
Organism: Arabidopsis thaliana
Length: 636 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465379, gi|....

Description E-value Query
Range
Subject
Range
gi|7019648, gi|1... - gi|7019648|emb|CAB75749.1| putative protein [Arabidopsis thaliana], pir||T47654 hypothetical protein...
604.0 [0..15] [636..12]

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Predicted Domain #1
Region A:
Residues: [1-636]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKMAKFSFF SSSSPKYHPS SPSSFTSFPA SPLNQNFTQA MMEETVETAD SVIRKWDPNT  60
   61 PSFTKIVSLF NHSRKEAKEF IRCVRDLRRA MHFLVSQDSQ SPKLALAQTL MQIAMARLEK 120
  121 EFFQILSSNR DKLDPESVSG QSSISSNSEF EDVMGSDDDD ESDNEMRKAG ESITQVEKAS 180
  181 AMVMSDLKAI AESMISCGYG KECVKIYKRV RKSIVDEGLS LLGIEIYKGS RFHRTDWVTL 240
  241 EHMIKNWIKA AKIGIATLFR GEKLLCDHVF SASNSTRESC FYEIANEAAT NLFKFPEFVA 300
  301 KEKKSHERIF PLMDLQAAIS DLWQDIEMIF HFDAVAGVKS QALTSLQKLK VSIHSALTDF 360
  361 ESIIQKDTTK ALTPGGGIHK LTRSTMNFIS SLSKYSGVLS EILADHPLPR NTRLLESYVR 420
  421 APISEDEQHN HALSVHFAWL ILVLLCKLDT KAEHYKDVSL SYLFLANNLQ IIIETVGSTP 480
  481 LRNLLGDDWL NKHEDKLCAY AGNYEIAAWS NVFMSLPEEP TDLSPEEAKI YFRRFHTAFE 540
  541 EAYMKQSSRV VPNAKLRDEL KVSIAKKLVP EYREFYRKYL PMLGQERNIE ILVRFKPDNL 600
  601 ENYISDLFHG TPIHASSSFS SSSSSSSWKS LGCVSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle