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View Structure Prediction Details

Protein: PTR12_ARATH
Organism: Arabidopsis thaliana
Length: 567 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR12_ARATH.

Description E-value Query
Range
Subject
Range
PTR1_ARATH - Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
364.0 [0..5] [562..2]

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Predicted Domain #1
Region A:
Residues: [1-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVEMHGDVS KWEGYADWRN KAALRGRHGG MLAASFVLAV EILENLAFLA NASNLVLYLK  60
   61 NFMHMSLARS SSEVTTFMAT AFLLALLGGF LADAFFSTFV IFLISASIEF LGLILLTIQA 120
  121 RRPSLMPPPC KSSAALRCEV VGGSKAAFLF VGLYLVSLGI GGIKGSLPSH GAEQFDEGTP 180
  181 KGRKQRSTFF NYYVFCLSCG ALVAVTFVVW IEDNKGWEWG FGVSTISIFL SILVFLLGSR 240
  241 FYKNKIPRGS PLTTIFKVLL AASIVSCSSK TSSNHFTSRE VQSEHEEKTP SQSLTNSLTC 300
  301 LNKAIEGKTH HIWLECTVQQ VEDVKIVLKM LPIFGCTIML NCCLAQLSTY SVHQAATMNR 360
  361 KIVNFNVPSA SLPVFPVVFM LILAPTYDHL IIPFARKVTK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2gfpA
Description: No description for 2gfpA was found.

Predicted Domain #2
Region A:
Residues: [401-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEIGITHLQR IGVGLVLSIV AMAVAALVEL KRKQVAREAG LLDSEETLPI TFLWIALQYL  60
   61 FLGSADLFTL AGLLEFFFTE APSSMRSLAT SLSWASLALG YYLSSVMVPI VNRVTKSAGQ 120
  121 SPWLGEKLNR NRLDLFYWLM CVLSVVNFLH YLFWAKRYKY ISTGSIS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.34
Match: 2v8nA
Description: No description for 2v8nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle