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View Structure Prediction Details

Protein: BGAL3_ARATH
Organism: Arabidopsis thaliana
Length: 856 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BGAL3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST  60
   61 PDMWEDLIQK AKDGGIDVIE T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.39794
Match: 3d3aA
Description: No description for 3d3aA was found.

Predicted Domain #2
Region A:
Residues: [82-720]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVFWNLHEPS PGKYDFEGRN DLVRFVKTIH KAGLYAHLRI GPYVCAEWNF GGFPVWLKYV  60
   61 PGISFRTDNE PFKRAMKGFT ERIVELMKSE NLFESQGGPI ILSQIENEYG RQGQLLGAEG 120
  121 HNYMTWAAKM AIATETGVPW VMCKEDDAPD PVINTCNGFY CDSFAPNKPY KPLIWTEAWS 180
  181 GWFTEFGGPM HHRPVQDLAF GVARFIQKGG SFVNYYMYHG GTNFGRTAGG PFVTTSYDYD 240
  241 APIDEYGLIR QPKYGHLKEL HRAIKMCEKA LVSADPVVTS IGNKQQAHVY SAESGDCSAF 300
  301 LANYDTESAA RVLFNNVHYN LPPWSISILP DCRNAVFNTA KVGVQTSQME MLPTDTKNFQ 360
  361 WESYLEDLSS LDDSSTFTTH GLLEQINVTR DTSDYLWYMT SVDIGDSESF LHGGELPTLI 420
  421 IQSTGHAVHI FVNGQLSGSA FGTRQNRRFT YQGKINLHSG TNRIALLSVA VGLPNVGGHF 480
  481 ESWNTGILGP VALHGLSQGK MDLSWQKWTY QVGLKGEAMN LAFPTNTPSI GWMDASLTVQ 540
  541 KPQPLTWHKT YFDAPEGNEP LALDMEGMGK GQIWVNGESI GRYWTAFATG DCSHCSYTGT 600
  601 YKPNKCQTGC GQPTQRWYHV PRAWLKPSQN LLVIFEELG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 1cygA
Description: CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE)
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [721-856]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK  60
   61 FASFGTPLGT CGSYQQGECH AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT 120
  121 VEAVCAPETS VSTWRP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.522879
Match: 2jx9A
Description: No description for 2jx9A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle