| Protein: | XRN4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 947 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XRN4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
926.0 | [0..1] | [894..1] |
|
|
924.0 | [0..1] | [947..1] |
|
|
883.0 | [0..1] | [894..1] |
|
|
881.0 | [0..1] | [894..1] |
|
|
881.0 | [0..1] | [894..65] |
|
|
880.0 | [0..1] | [894..1] |
|
|
880.0 | [0..1] | [894..1] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MGVPAFYRWL ADRYPKSISD VVEEEPTDGG RGDLIPVDIT RPNPNGFEFD NLYLDMNGII 60
61 HPCFHPEGKP APATYDDVFK SMFEYIDHLF TLVRPRKILY LAIDGVAPRA KMNQQRSRRF 120
121 RAAKDAAEAE AEEERLRKDF EMEGQILSAK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [151-281] |
1 11 21 31 41 51
| | | | | |
1 EKAETCDSNV ITPGTPFMAI LSVALQYYIQ SRLNHNPGWR YVKVILSDSN VPGEGEHKIM 60
61 SYIRLQRNLP GFDPNTRHCL YGLDADLIML SLATHEVHFS ILREVITYPG QQEKCFVCGQ 120
121 TGHFASDCPG K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-498] |
1 11 21 31 41 51
| | | | | |
1 SGSNNAAADI PIHKKKYQFL NIWVLREYLQ YELAIPDPPF MINFERIIDD FVFLCFFVGN 60
61 DFLPHMPTLE IREGAINLLM HVYRKEFTAM GGYLTDSGEV LLDRVEHFIQ AVAVNEDKIF 120
121 QKRTRIKQSM DNNEEMKQRS RRDPSEVPPE PIDDKIKLGE PGYKERYYAE KFSTTNPEET 180
181 EQIKQDMVLK YVEGLCWVCR YYYQGVCSWQ WFYPYHY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [499-597] |
1 11 21 31 41 51
| | | | | |
1 APFASDLKNL PDLEITFFIG EPFKPFDQLM GTLPAASSNA LPGEYRKLMT DPSSPILKFY 60
61 PADFELDMNG KRFAWQGIAK LPFIEEKLLL AATRKLEET
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [598-947] |
1 11 21 31 41 51
| | | | | |
1 LTVEEQQRNS VMLDLLYVHP AHPLGQRILQ YYHFYQHMPP HECLPWMIDP NSSQGMNGFL 60
61 WFSERNGFQT RVDSPVNGLP CIEQNRALNV TYLCPAKHSH ISEPPRGAII PDKILTSVDI 120
121 KPFPPLWHED NSNRRRQARD RPQVVGAIAG PSLGEAAHRL IKNTLNMKSS TGAASGLIDP 180
181 NGYYRNVPGN YSYGGVNRPR APGPSPYRKA YDDDSSYYYG KYNNSTQGTF NNGPRYPYPS 240
241 NGSQDYNRNY NSKIVAEQHN RGGLGAGMSG LSIEDNGRSK QLYSSYTEAA NANLNPLPSP 300
301 PTQWIGTQPG GNFVGGYYRD GVGYSETNGK SVKKVIYQAK TQPSHRGANL
|
| Detection Method: | |
| Confidence: | 22.221849 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
