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View Structure Prediction Details

Protein: gi|20259225, gi|...
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259225, gi|....

Description E-value Query
Range
Subject
Range
gi|50918913, gi|... - gi|50918913|ref|XP_469853.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|222625840|...
gi|218193793 - gi|218193793|gb|EEC76220.1| hypothetical protein OsI_13623 [Oryza sativa Indica Group]
385.0 [0..10] [288..16]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METVVDKDVL KSSGAELLPD GRRGLRIHDW EIETLRGTIL TSLAVEEWEK KLKTSHLPEM  60
   61 VFGENALVLK HLGSNTKIHF NAFDALAGWK QEGLPPVEVP AAAQWKFRSK PSQQVILDYD 120
  121 YTFTTPYCGS EVVEKDKETV EAKANPKGEA TLQWENCEDQ IDLAALSLKE PILFYDEVVL 180
  181 YEDELADNGV SLLTVKVRVM PSSWFLLLRF WLRVDGVLMR LRETRMHYRF GEDEAPTVLR 240
  241 ENCWREATFQ SLSAKGYPVD LAVWSDPSSI SQRLPVIKHT TQKLKIPSKV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 142.244125
Match: PF04176.4
Description: No description for PF04176.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle