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View Structure Prediction Details

Protein: gi|222422961, gi...
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222422961, gi....

Description E-value Query
Range
Subject
Range
gi|8843854 - gi|8843854|dbj|BAA97380.1| unnamed protein product [Arabidopsis thaliana]
221.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK  60
   61 MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK PNICKISFVA HSLGGLAARY 120
  121 AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF 180
  181 SSIEKVAGLI IHWIFKRTGR HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY 240
  241 SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.221849
Match: 1va4A
Description: Pseudomonas fluorescens aryl esterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [294-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENHSDDIEEE MIKGLSSVSW EKVDVSFHSS RQRFAAHSVI QVKNEDMHIE GADVIEHIID  60
   61 HFHA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle