| Protein: | gi|28827260, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 719 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28827260, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..3] | [719..16] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MKMTIWSLCL ILSLSNSKLV LASHVKHLCR QDQKNALLEF KNEFYVHEFN SNGIVGVKKT 60
61 EKWRNNTDCC SWDGISCDPK
|
| Detection Method: |  |
| Confidence: | 46.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [81-719] |
1 11 21 31 41 51
| | | | | |
1 TGKVVELDLM NSFLNGPLRY DSSLFRLQHL HNLDLGSNNF SGILPDSIGS LKYLRVLSLG 60
61 DCNLFGKIPS SLGNLTYLTN LDLSVNDFTG ELPDSMGHLN KLTELHLGSA KLSGNFPSML 120
121 LNLSELTLID LGSNQFGGML PSNMSSLSKL VYFGIDRNSF SGSIPSSLFM LPSLTSLVLG 180
181 RNDFNGPLDF GNISSPSNLG VLSLLENNFN GPIPESISKL VGLFYLDLSL WNTKRGMVDF 240
241 NTFLHLKSLT FLDLSYINTR SMVDISIFSP LLSLGYLDLS GINLKISSTL SLPSPMGTLI 300
301 LSSCNIPEFP NFLENQTTLY YLDISANKIG GQVPQWLWSL PELQYVNISQ NSFSGFEGPA 360
361 DVIQRCGELL MLDISSNTFQ DPFPLLPNST TIFLGSDNRF SGEIPKTICK LVSLDTLVLS 420
421 NNNFNGSIPR CFEKFNTTLS VLHLRNNNLS GEFPEESISD HLRSLDVGRN RLSGELPKSL 480
481 INCTRLEFLN VEDNIINDKF PFWLRMLPKL QIFVLRSNEF HGPISSLGDS LSFPKLRIFD 540
541 ISENRFNGVL RSDFFAGWSA MSSAVDIVDI MPSRYAGRDS GNYYNSVTMT VKGSIIELVG 600
601 SVFTIYKTID VSGNRFEGRI PESIGLLKEL IVLNMSNNG
|
| Detection Method: | |
| Confidence: | 52.221849 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
