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View Structure Prediction Details

Protein: gi|19310799, gi|...
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19310799, gi|....

Description E-value Query
Range
Subject
Range
gi|23297558, gi|... - gi|23297558|gb|AAN12895.1| unknown protein [Arabidopsis thaliana], gi|22331580|ref|NP_190001.2| unkn...
400.0 [0..9] [246..15]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARFFLLCCL FAAVLTSSLT EAGDNNQVYS PCSDSTVAIG DGFTFGIAFA AKDSFFSTNR  60
   61 SKSVQYSPCD HRHLSLNGNS EVAVFRPKVD EITLLTINTS SSSSFRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DASKGYMVAF AGAKYAARSL PIMVADSNHI VTSFTLVLEF QKGRLENMFW KKDGCSKCSG  60
   61 DSKFVCLNKE ECAIKPQNCK NQGGQVDCSL GIQLAFSGTD KHYTALNSWY EVANLKQYSL 120
  121 YGLYSNLKDS LTNPFKNIF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle