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View Structure Prediction Details

Protein: SAMC1_ARATH
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAMC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|114674911 - gi|114674911|ref|XP_524071.2| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]
277.0 [0..55] [312..367]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLTLSVDV KSSSATSHDV SKRVMQSSQL KINKGFFASV NTQEDKPFDF FRTLFEGFIA  60
   61 GGTAGVVVET ALYPIDTIKT RLQAARGGGK IVLKGLYSGL AGNIAGVLPA SALFVGVYEP 120
  121 TKQKLLKTFP DHLSAVAHLT AGAIGGLAAS LIRVPTEVVK QRMQTGQFTS APSAVRMIAS 180
  181 KEGFRGLYAG YRSFLLRDLP FDAIQFCIYE QLCLGYKKAA RRELSDPENA LIGAFAGALT 240
  241 GAVTTPLDVI KTRLMVQGSA KQYQGIVDCV QTIVREEGAP ALLKGIGPRV LWIGIGGSIF 300
  301 FGVLESTKRT LAQRRPNTVK ETKEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle