| Protein: | Y5838_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 620 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5838_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..1] | [620..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG 60
61 YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA DLTGLDLSRN NFSGPLPANI 120
121 STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLM
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-277] |
1 11 21 31 41 51
| | | | | |
1 LQHNQFTGTL PPQLAQLGRL KTFSVSDNRL VGPIPNFNQT LQFKQELFAN NLDLCGKPLD 60
61 DCKSASSSRG KVVIIAAVGG LTAAALVVGV VLFFYFRKLG AVRKKQDDPE GNRWAKSLKG 120
121 QK
|
| Detection Method: | |
| Confidence: | 3.66 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [278-620] |
1 11 21 31 41 51
| | | | | |
1 GVKVFMFKKS VSKMKLSDLM KATEEFKKDN IIATGRTGTM YKGRLEDGSL LMIKRLQDSQ 60
61 RSEKEFDAEM KTLGSVKNRN LVPLLGYCVA NKERLLMYEY MANGYLYDQL HPADEESFKP 120
121 LDWPSRLKIA IGTAKGLAWL HHSCNPRIIH RNISSKCILL TAEFEPKISD FGLARLMNPI 180
181 DTHLSTFVNG EFGDFGYVAP EYSRTMVATP KGDVYSFGVV LLELVTGQKA TSVTKVSEEK 240
241 AEEENFKGNL VEWITKLSSE SKLQEAIDRS LLGNGVDDEI FKVLKVACNC VLPEIAKQRP 300
301 TMFEVYQLLR AIGESYNFTA DDDILIPSES GEGDFIEELI VAR
|
| Detection Method: | |
| Confidence: | 63.221849 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
