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View Structure Prediction Details

Protein: ENT1_ARATH
Organism: Arabidopsis thaliana
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3176684, gi|7... - pir||T01489 hypothetical protein F17O7.13 - Arabidopsis thaliana, gi|3176684|gb|AAC18807.1| Contains...
204.0 [0..23] [450..1]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPISQRISQ KSPKLRETKQ IQMTTTDKSA GIVTDSEAGP ETSLLLNPHE GSTKKAPSDS  60
   61 YHFAYIIYFT LGVGFLLPWN AFITAVDYFS YLYPSTAVDR IFAVIYMLVA LVCLFVIVVF 120
  121 YAHKSLASFR INLGLLLFVI ALLVVPVLDL VYVKGQVGLY AGFDVTSAAV ALSGLGDALM 180
  181 QGGLIGVAGE MPERYMQAVV AGTAGSGVLV SLLRILTKAV YPQDPDGLRK SANLYFAVGI 240
  241 VVMVICAVFY NVAHKLPVIK FHEERKNEEL IREKSEEKGS LTGLAWRTTL WDIVTKVKSH 300
  301 GFGIVLLYMV TLSIFPGYIT EDVHSELLTD WYPILLIAAY NVFDLVGKCL TAVFMLEDEK 360
  361 IAVGGSIARL LFYPLFWGCL HGPMFLRTEI PVTILTCLLG LTNGYLTSVL MILAPKSVPL 420
  421 RHSETAGIVT VMFLVVGLAS GSVIAWFWVI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 4.09176719149278 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.54194478414824 bayes_pls_golite062009
ion transmembrane transporter activity 2.21266150105753 bayes_pls_golite062009
cation transmembrane transporter activity 1.79369588808394 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
binding 0.818732184064642 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
sugar:hydrogen symporter activity 0.143419068761182 bayes_pls_golite062009
cation:sugar symporter activity 0.143419068761182 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle