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View Structure Prediction Details

Protein: EXPA2_ARATH
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPA2_ARATH.

Description E-value Query
Range
Subject
Range
EXPA2_ARATH, EXP... - (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2) (Ath-ExpAlpha-1.12), (Q38866) Alpha-...
381.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTEYSHIL FLSLCTLNFC LYSINSDDNG GWERGHATFY GGADASGTMG GACGYGNLHS  60
   61 QGYGLQTAAL STALFNSGQK CGACFELQCE DDPEWCIPGS IIVSATNFCP PNFALANDNG 120
  121 GWCNPPLKHF DLAEPAFLQI AQYRAGIVPV AFRRVPCEKG GGIRFTINGN PYFDLVLITN 180
  181 VGGAGDIRAV SLKGSKTDQW QSMSRNWGQN WQSNTYLRGQ SLSFQVTDSD GRTVVSYDVV 240
  241 PHDWQFGQTF EGGQF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1n10A
Description: PHL P 1 C-terminal domain; Pollen allergen PHL P 1 N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle