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View Structure Prediction Details

Protein: HHT1_ARATH
Organism: Arabidopsis thaliana
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HHT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|23125759 - gi|23125759|ref|ZP_00107678.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
319.0 [0..21] [457..3787]

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Predicted Domain #1
Region A:
Residues: [1-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAENNKNKD VTLSASMDNN NNNIKGTNIH LEVHQKEPAL VKPESETRKG LYFLSNLDQN  60
   61 IAVIVRTIYC FKSEERGNEE AVQVIKKALS QVLVHYYPLA GRLTISPEGK LTVDCTEEGV 120
  121 VFVEAEANCK MDEIGDITKP DPETLGKLVY DVVDAKNILE IPPVTAQVTK FKCGGFVLGL 180
  181 CMNHCMFDGI GAMEFVNSWG QVARGLPLTT PPFSDRTILN ARNPPKIENL HQEFEEIEDK 240
  241 SNINSLYTKE PTLYRSFCFD PEKIKKLKLQ ATENSESLLG NSCTSFEALS AFVWRARTKS 300
  301 LKMLSDQKTK LLFAVDGRAK FEPQLPKGYF GNGIVLTNSI CEAGELIEKP LSFAVGLVRE 360
  361 AIKMVTDGYM RSAIDYFEVT RARPSLSSTL LITTWSRLGF HTTDFGWGEP ILSGPVALPE 420
  421 KEVTLFLSHG EQRRSINVLL GLPATAMDVF QEQFLQI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle