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View Structure Prediction Details

Protein: SEH1_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
331.0 [0..2] [326..1165]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSMATLDS GTTCSSWNQS GDRLAAGSLN GKLSIYESST SSSSTFSCTS KVRVSESSIV  60
   61 KIVWLPSEYG DAVACVCEDG SLSIWEELSE DAHGLEWKLC KSMKNKSSQV LDVQFGVSRK 120
  121 SLKMVAAYSD GYLRVFELLN PLELKNWQLQ AEFQNVIDSL STLGKPSSLS ASVSWNPMKG 180
  181 EEQEPSFVLA FNSDSPHLNS SKIWEFDEAH NRWLAVAELA LPEDKGDPVY ALSWAPNIGR 240
  241 PYEVVAVATH KGIGIWHVGL APDLEGRLPV KKVSSLSGHQ GEVWQMEWDM SGMTLASTGS 300
  301 DGMVKLWQSN LNGEWHEQAT LEPVPS

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Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle