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View Structure Prediction Details

Protein: ICMTB_ARATH
Organism: Arabidopsis thaliana
Length: 197 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ICMTB_ARATH.

Description E-value Query
Range
Subject
Range
gi|71006102, gi|... - gi|71006102|ref|XP_757717.1| hypothetical protein UM01570.1 [Ustilago maydis 521], ref|XP_399185.1| ...
163.0 [0..1] [196..2117]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEIFSDTGF RQLTQMFLAI IFFHTSEYIL AIAIHGASKV TLSSLLISKH YALAMLISVL  60
   61 EYIAEIVFFP GLKQHWWISN FGLTMIILGE ILRKTAIITA GRSFTHLIKI RREEHHKLVT 120
  121 EGVYQIMRHP SYSGFLIWSV GTQVMLCNPI SAIAFAVVVW RFFAERIPYE EHYLKQFFGR 180
  181 QYVEYAQRVP SGVPFVN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.443697
Match: PF04140.5
Description: No description for PF04140.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle