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View Structure Prediction Details

Protein: TLP7_ARATH
Organism: Arabidopsis thaliana
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TLP7_ARATH.

Description E-value Query
Range
Subject
Range
gi|125552479 - gi|125552479|gb|EAY98188.1| hypothetical protein OsI_20103 [Oryza sativa Indica Group]
TLP8_ORYSJ - Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1
547.0 [0..2] [379..16]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE  60
   61 ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT FPSCL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.24
Match: 2e31A
Description: No description for 2e31A was found.

Predicted Domain #2
Region A:
Residues: [106-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPGPRDFSN QCLIKRNKKT STFYLYLALT PSFTDKGKFL LAARRFRTGA YTEYIISLDA  60
   61 DDFSQGSNAY VGKLRSDFLG TNFTVYDSQP PHNGAKPSNG KASRRFASKQ ISPQVPAGNF 120
  121 EVGHVSYKFN LLKSRGPRRM VSTLRCPSPS PSSSSAGLSS DQKPCDVTKI MKKPNKDGSS 180
  181 LTILKNKAPR WHEHLQCWCL NFHGRVTVAS VKNFQLVATV DQSQPSGKGD EETVLLQFGK 240
  241 VGDDTFTMDY RQPLSAFQAF AICLTSFGTK LACE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1c8zA
Description: Transcriptional factor tubby, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle