| Protein: | BBD2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBD2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
450.0 | [0..1] | [329..1] |
|
|
380.0 | [0..3] | [324..2] |
|
|
341.0 | [0..1] | [324..1] |
|
|
284.0 | [0..3] | [241..2] |
|
|
261.0 | [0..89] | [324..94] |
|
|
233.0 | [0..119] | [321..1] |
|
|
230.0 | [0..119] | [318..1] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MRSLQAPVVC PSVRPRQLGV SALLVNCSVS KTRSLRKQFW GNQTKNDKSQ AATVNLRLHL 60
61 RRYKSIKCLF SSHSDGTGST AENFNENDED YVKSSVLEAV EVKSGPDGFM VKMKD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.235 | a.47.2 | t-snare proteins |
| View | Download | 0.235 | a.47.2 | t-snare proteins |
|
Region A: Residues: [116-254] |
1 11 21 31 41 51
| | | | | |
1 GRQLRCVHNN PQGGNLPNYA PHSAIVLKME DGTGLLLPII VLEMPSVLLM AAMTNVQIAR 60
61 PTMYQVVKDM VDKMGYEVRL VRVTTRVHEA YFAELYLSKV GDKSDCVSFD LRPSDAINIA 120
121 VRCKVPIQVN KYLAYSDGM
|
| Detection Method: | |
| Confidence: | 35.154902 |
| Match: | 1sj5A |
| Description: | CRYSTAL STRUCTURE OF C38A MUTANT OF HYPOTHETICAL PROTEIN (TM0160) FROM THERMOTOGA MARITIMA AT 2.8 A RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [255-329] |
1 11 21 31 41 51
| | | | | |
1 RVIDSGKLSK QTPASDGLLF TELDRPNGQP CFDTKEFDLV RNMMQAVDEE RYDEAAEWRD 60
61 KLGKFQAKRK LRKYT
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1d2mA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
