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View Structure Prediction Details

Protein: gi|13430602, gi|...
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13430602, gi|....

Description E-value Query
Range
Subject
Range
gi|10092274, gi|... - pir||F96782 hypothetical protein F22H5.5 [imported] - Arabidopsis thaliana, gi|10092274|gb|AAG12687...
277.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEHSPSQPS SHTLPPNQPE SPNHETPNPI PPETNDDDSA SSAGVSGSIV SSTTIEAPQV  60
   61 TELGNVSSPP TKIPLRPRKI RKLSPDDDAS DGFNPEHNLS QMTTTKPATK SKLSQSRTVT 120
  121 VPRIQARSLT CE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GELEAALHHL RSVDPLLASL IDIHPPPTFE TFQTPFLALI RSILYQQLAA KAGNSIYTRF  60
   61 VALCGGENGV VPENVLPLTP QQLRQIGVSG RKASYLHDLA RKYQNGILSD SGIVNMDEKS 120
  121 LFTMLTMVNG IGSWSVHMFM INSLHRPDVL PVNDLGVRKG VQMLNGMEDL PRPSKMEQLC 180
  181 EKWRPYRSVA SWYLWRLIES KNTPPNAAAA TAGAALSFPQ LEDIQQQEQE QQHQQHQQQQ 240
  241 PQLMDPLNNV FSIGAWGQT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.154902
Match: 2h56A
Description: No description for 2h56A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle