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View Structure Prediction Details

Protein: OEP80_ARATH
Organism: Arabidopsis thaliana
Length: 732 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OEP80_ARATH.

Description E-value Query
Range
Subject
Range
gi|26988331, gi|... - gi|26988331|ref|NP_743756.1| surface antigen family outer membrane protein [Pseudomonas putida KT244...
499.0 [0..1] [730..14]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR  60
   61 HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST QFNWSESRDE NVETIRGLSS 120
  121 PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK 180
  181 DLEMEALAAL KACRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.522879
Match: 2qczA
Description: No description for 2qczA was found.

Predicted Domain #2
Region A:
Residues: [196-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSALTIREVQ EDVHRIIESG YFCSCTPVAV DTRDGIRLMF QVEPNQEFRG LVCENANVLP  60
   61 SKFIHEAFRD GFGKVINIKR LEEAITSING WYMERGLFGI VSDIDTLSGG IVRLQVAEAE 120
  121 VNNISIRFLD RKTGEPTKGK TSPETILRQL TTKKGQVYSM LQGKRDVDTV LAMGIMEDVS 180
  181 IIPQPAGDSG KVDLIMNCVE RPSGGFSAGG GISSGITSGP LSGLIGSFAY SHRNLFGRNQ 240
  241 KLNVSLERGQ IDSIFRINYT DPWIEGDDKR TSRSIMVQNS RTPGNLVHGN QPDNSSLTIG 300
  301 RVTAGVEYSR PFRPKWNGTA GLIFQHAGAR DEQGNPIIKD FYSSPLTASG KPHDETMLAK 360
  361 LESIYTGSGD QGSTMFAFNM EQGLPVLPEW LCFNRVTGRA RKGIHIGPAR FLFSLSGGHV 420
  421 VGKFSPHEAF VIGGTNSVRG YEEGAVGSGR SYVVGSGELS FPVRGPVEGV IFTDYGTDMG 480
  481 SGSTVPGDPA GARLKPGSGY GYGLGVRVDS PLGPLRLEYA FNDQHAGRFH FGVGLRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle