| Protein: | gi|14532598, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 703 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14532598, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
440.0 | [0..3] | [700..1] |
|
Region A: Residues: [1-225] |
1 11 21 31 41 51
| | | | | |
1 MLMDSSFFLT IVAAAFAIGF FIFLRKLRIH QENEDVGSSS TSPPSSLASS TSPPSTLSSS 60
61 TSHPSSSTSP PSSLSCTGTH HVFPSFRGDD VRRNFLSHIQ KEFRRKGITP FIDNEIRRGE 120
121 SIGPELIKAI RESKIAIVLL SRNYASSKWC LEELVEIMKC KKEFGLTVFA IFYEVDPSHV 180
181 KKLTGEFGAV FQKTCKGRTK ENIMRWRQAF EEVATIAGYD SRNWE
|
| Detection Method: |  |
| Confidence: | 4.42 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [226-703] |
1 11 21 31 41 51
| | | | | |
1 NEAAMIEEIA IEISKRLINS SPFSGFEGLI GMKAHIEKMK QLLCLDSTDE RRTVGISGPS 60
61 GIGKSTIARV LHNQISDGFQ MSVFMKFKPS YTRPICSDDH DVKLQLEQQF LAQLINQEDI 120
121 KIHQLGTAQN FVMGKKVLIV LDGVDQLVQL LAMPKAVCLG PGSRIIITTQ DQQLLKAFQI 180
181 KHIYNVDFPP DHEALQIFCI HAFGHDSPDD GFEKLATKVT RLAGNLPLGL RVMGSHFRGM 240
241 SKEDWKGELP RLRIRLDGEI GSILKFSYDV LDDEDKDLFL HIACFFNDEG IDHTFEDTLR 300
301 HKFSNVQRGL QVLVQRSLIS EDLTQPMHNL LVQLGREIVR NQSVYEPGKR QFLVDGKEIC 360
361 EVLTSHTGSE SVIGINFEVY WSMDELNISD RVFEGMSNLQ FFRFDENSYG RLHLPQGLNY 420
421 LPPKLRILHW DYYPMTSLPS KFNLKFLVKI ILKHSELEKL WEGIQVSIYH SFMKFILF
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
