| Protein: | PME25_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 619 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME25_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
558.0 | [0..3] | [619..1] |
|
Region A: Residues: [1-249] |
1 11 21 31 41 51
| | | | | |
1 MKMQTLNFTS SLLFLSFIFL SCALLISSQQ SPSQPHSEPP SQLPFEPPVE SPFFPPSQPP 60
61 IFVPPSQPPS LPPSQSQSPS LACKSTPYPK LCRTILNAVK SSPSDPYRYG KFTIKQCLKQ 120
121 ASRLSKVITS YARRVESKPG SATAEEIGAV ADCGELSELS VNYLETVTTE LKTAQVMTAA 180
181 LVEHVNSLLS GVVTNQQTCL DGLVEAKSGF AAAIGSPMGN LTRLYSISLG LVSHALNRNL 240
241 KRFKASKGK
|
| Detection Method: |  |
| Confidence: | 19.154902 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [250-619] |
1 11 21 31 41 51
| | | | | |
1 ILGGGNSTYR EPLETLIKGL RKTCDNDKDC RKTSRNLGEL GETSGGSILV SKAVIVGPFK 60
61 SDNFTTITDA IAAAPNNTRP EDGYFVIYAR EGVYEEYIVV PINKKNLMLM GDGINKTIIT 120
121 GNHNVVDGWT TYNCSSFAVV GERFMAVDVT FRNTAGPEKH QAVALRNNAE GSSFYRCSFE 180
181 GYQDTLYVHS LRQFYRECDI YGTVDFIFGN AAAIFQNCNI YARKPMAKQK NAITAHGRLD 240
241 PNQNTGISII NCTIKAAPDL AAEPKSAMTF LGRPWKPYSR TVFMQSYISD IVQPVGWLEW 300
301 NGTIGLDTIY YGEYSNFGPG ANTNQRVQWL GYNLLNLAEA MNFTVYNFTM GDTWLPQTDI 360
361 PFYGGLLSKE
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
