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View Structure Prediction Details

Protein: NADK2_ARATH
Organism: Arabidopsis thaliana
Length: 985 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for NADK2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLCFCPCHV PIMSRLSPAT GISSRLRFSI GLSSDGRLIP FGFRFRRNDV PFKRRLRFVI  60
   61 RAQLSEAFSP DLGLDSQAVK SRDTSNLPWI GPVPGDIAEV EAYCRIFRSA ERLHGALMET 120
  121 LCNPVTGECR VPYDFSPEEK PLLEDKIVSV LGCILSLLNK GRKEILSGRS SSMNSFNLDD 180
  181 VGVAEESLPP LAVFRGEMKR CCESLHIALE NYLTPDDERS GIVWRKLQKL KNVCYDAGFP 240
  241 RSDNYPC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.09691
Match: 1ohcA
Description: Proline directed phosphatase CDC14b2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [248-704]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTLFANWDPI YSSNTKEDID SYESEIAFWR GGQVTQEGLK WLIENGFKTI VDLRAEIVKD  60
   61 TFYQTALDDA ISLGKITVVQ IPIDVRMAPK AEQVELFASI VSDSSKRPIY VHSKEGVWRT 120
  121 SAMVSRWKQY MTRPITKEIP VSEESKRREV SETKLGSNAV VSGKGVPDEQ TDKVSEINEV 180
  181 DSRSASSQSK ESGRFEGDTS ASEFNMVSDP LKSQVPPGNI FSRKEMSKFL KSKSIAPAGY 240
  241 LTNPSKILGT VPTPQFSYTG VTNGNQIVDK DSIRRLAETG NSNGTLLPTS SQSLDFGNGK 300
  301 FSNGNVHASD NTNKSISDNR GNGFSAAPIA VPPSDNLSRA VGSHSVRESQ TQRNNSGSSS 360
  361 DSSDDEAGAI EGNMCASATG VVRVQSRKKA EMFLVRTDGV SCTREKVTES SLAFTHPSTQ 420
  421 QQMLLWKTTP KTVLLLKKLG QELMEEAKEA ASFLYHQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 1ygrA
Description: Crystal structure of the tandem phosphatase domain of RPTP CD45
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [705-985]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENMNVLVEPE VHDVFARIPG FGFVQTFYIQ DTSDLHERVD FVACLGGDGV ILHASNLFKG  60
   61 AVPPVVSFNL GSLGFLTSHP FEDFRQDLKR VIHGNNTLDG VYITLRMRLR CEIYRKGKAM 120
  121 PGKVFDVLNE IVVDRGSNPY LSKIECYEHD RLITKVQGDG VIVATPTGST AYSTAAGGSM 180
  181 VHPNVPCMLF TPICPHSLSF RPVILPDSAK LELKIPDDAR SNAWVSFDGK RRQQLSRGDS 240
  241 VRIYMSQHPL PTVNKSDQTG DWFRSLIRCL NWNERLDQKA L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 2an1A
Description: Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle