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View Structure Prediction Details

Protein: gi|215708812, gi...
Organism: Oryza sativa Japonica Group
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215708812, gi....

Description E-value Query
Range
Subject
Range
gi|85118589 - gi|85118589|ref|XP_965478.1| hypothetical protein NCU02705 [Neurospora crassa OR74A]
gi|38567214, gi|... - gi|38567214|emb|CAE76506.1| related to F1F0 ATPase complex assembly protein [Neurospora crassa], gi|...
236.0 [0..44] [267..132]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRARWAAGM LRRASSGEAS LAARAVFARG FLGLNMKASK ETIEKKEKDK ARLMDEMSRG  60
   61 YFADIAEIRK NGGKLATANK IIIPEIAAVK FPDLSVKSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGRTVNLPLV APPRNDDPQT GNTVDTQNDD CKAGDMVVPD ASLVCLSFRA SSQKMAETWS  60
   61 LPFLDAFSSA GNIQVYEVSF IDSWLLSSSP VRQVFLKVMT KSNNPQRHAV YAFGDHYYFR 120
  121 KKLHILNLLT GYIYLVDRLG RVRWQGFGSA TQEELSSLTA CTSILLDGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 1kngA
Description: Thioredoxin-like protein CcmG (CycY, DsbE)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle