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View Structure Prediction Details

Protein: NIMI1_ARATH
Organism: Arabidopsis thaliana
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NIMI1_ARATH.

Description E-value Query
Range
Subject
Range
gi|9972391, gi|2... - gi|9972391|gb|AAG10641.1|AC022521_19 Hypothetical protein [Arabidopsis thaliana], pir||A86155 hypoth...
189.0 [0..16] [142..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPKQFSLYN YSLETMSKDE NVESKETIRV DKRVREDEEE EEEKKIDTFF KLIKHYQEAR  60
   61 KRRREELAEN SGVVRRKSNG GERSGIVVPA FQPEDFSQCR TGLKPPLMFV SDHKEENTKV 120
  121 EQEEDQTEER NEDKALDLNL AL

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.670 f.18.1 F1F0 ATP synthase subunit A
View Download 0.670 f.18.1 F1F0 ATP synthase subunit A
View Download 0.560 a.2.14 Description not found.
View Download 0.543 d.123.1 Sporulation responce regulatory protein Spo0B
View Download 0.543 d.123.1 Sporulation responce regulatory protein Spo0B
View Download 0.500 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.482 a.47.2 t-snare proteins
View Download 0.482 a.47.2 t-snare proteins
View Download 0.441 a.7.4 Smac/diablo


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