| Protein: | gi|30697546, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 355 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30697546, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..6] | [355..30] |
|
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321.0 | [0..34] | [355..13] |
|
|
288.0 | [0..11] | [355..44] |
|
|
230.0 | [0..69] | [353..8] |
|
|
229.0 | [0..70] | [354..7] |
|
|
227.0 | [0..71] | [353..29] |
|
|
224.0 | [0..72] | [353..5] |
|
|
223.0 | [0..72] | [353..5] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MMMRLVQVSS TESISSISAS SARNGGVLYL KRGSVCVCRV LKPNKVALNS MILSAMRTCS 60
61 ISGFHTHLPK SSGSVSSR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.759 | b.61.8 | Description not found. |
| View | Download | 0.641 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.602 | d.304.1 | Description not found. |
| View | Download | 0.602 | b.61.8 | Description not found. |
| View | Download | 0.568 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.548 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.532 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.510 | b.1.18 | E set domains |
| View | Download | 0.505 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.477 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.301 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.280 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.276 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.260 | b.40.16 | Description not found. |
| View | Download | 0.258 | d.58.4 | Dimeric alpha+beta barrel |
|
Region A: Residues: [79-355] |
1 11 21 31 41 51
| | | | | |
1 KRFSSTALSL ITQTISPFAH PRSSVIVSSL LSPSDIPQKS EEWFALRKDK LTTSTFSTAL 60
61 GFWKGNRRAE LWHEKVYDSD ARVVEESARF AMNWGVQMES SAIERYKRIM GCEVGTMGFA 120
121 IHSNEEFHWL GASPDGILDC FGILEVKCPY NKGKTETVLP WKKVPYYYMP QLQGQMEIMD 180
181 REWVNLYCWT RNGSTVFRVM RDRSYWRIIH DVLREFWWES VIPAREALLL GKEDEEVKKY 240
241 EPTSTHKRTK LAIAKSLNLA AESKLVCREI ADHVEFF
|
| Detection Method: | |
| Confidence: | 38.522879 |
| Match: | 1avqA |
| Description: | lambda exonuclease |
Matching Structure (courtesy of the PDB): |
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