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View Structure Prediction Details

Protein: GUX6_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUX6_ARATH.

Description E-value Query
Range
Subject
Range
gi|23506001, gi|... - gi|23506001|gb|AAN28860.1| At5g18480/F20L16_200 [Arabidopsis thaliana], gi|18087513|gb|AAL58891.1|AF...
552.0 [0..1] [537..1]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK  60
   61 DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT RFWGVYTKLK IFNMTDYKKV 120
  121 VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT 180
  181 GGDQGFLNSY YPDFPNARVF DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD 240
  241 DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL 300
  301 FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH 360
  361 SG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [363-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAQSKVPQHL GAVSVVVCFT AVLLSLGISF AIVPRQIMPW TGLVLVYEWT FTIFFLLFGV  60
   61 FLLFVHQHGK RIAIQSESSS LDDSAKVHQR AGGSCDVTTL YYGLGMAFLA IAAVSLPYIL 120
  121 GITALFTRLG LMVGLAIILA AFMTYASEHL AVRWFLKGLE DRRDTTRSNS LCFLC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle