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View Structure Prediction Details

Protein: TPPH_ARATH
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPPH_ARATH.

Description E-value Query
Range
Subject
Range
TPPE_ARATH - Probable trehalose-phosphate phosphatase E OS=Arabidopsis thaliana GN=TPPE PE=2 SV=1
241.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRFIEENTK LVEKETGNKS NNDVTTTKKK ALQDIIINNG VGLINSWVDS MRACSPTHLK  60
   61 SLLKQSSWLT EHPSALDMFE EILHLSEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [89-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQIVMFLDYD GTLSPIVDDP DRAFMSRKMR RTVRKLANCF PTAIVSGRCI EKVYNFVKLT  60
   61 ELYYAGSHGM DIKGPEQGSK YEQILQDSKS LLCQPATEFL PMIDEVYHKL VEKTKSTPGA 120
  121 QVENNKFCVS VHFRRVDENN WSDLANQVRS VMKDYPKLRL TQGRKVLEVR PIIKWDKGKA 180
  181 LEFLLESLGY ANCTDVFPLY IGDDRTDEDA FKVLRERRQG LGILVSKFPK ETSASYSLQE 240
  241 PDEVMEFLQR LVEWKQLRSG A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.522879
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.92340854382984 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle