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View Structure Prediction Details

Protein: OS9_ARATH
Organism: Arabidopsis thaliana
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OS9_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592392 - gi|21592392|gb|AAM64343.1| unknown [Arabidopsis thaliana]
331.0 [0..1] [282..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRITQILLCL VIVALSSSSH VWSDQIFPAH LVGTFSRNNR EPKYKIEFLP EDSPFHPGDN  60
   61 LESMVMLDKH GNRFLCYL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.748 g.3.13 Bowman-Birk inhibitor, BBI
View Download 0.631 d.40.1 CI-2 family of serine protease inhibitors
View Download 0.592 d.40.1 CI-2 family of serine protease inhibitors
View Download 0.584 d.40.1 CI-2 family of serine protease inhibitors
View Download 0.570 d.40.1 CI-2 family of serine protease inhibitors

Predicted Domain #2
Region A:
Residues: [79-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKEEKATSGW TSSQQNISTV MMETQQLVKL KTPDELLQPL SEKCLFRQEG WWSYEFCHQK  60
   61 YVRQLHVEDE NKIVQEFFLG TFDPEATAAF NQTVSDASTD ASQRYHSHVY TNGTTCDLTG 120
  121 SPREVEVRFV CAETRAMVTS ITELSTCKYA LTVQCPTLCK HPLFQLEKPV SHTIHCNAIP 180
  181 VEEDATRNKE EQAVDESPKM IADS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.91
Match: 1keoA
Description: Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle