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View Structure Prediction Details

Protein: gi|51969050, gi|...
Organism: Arabidopsis thaliana
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51969050, gi|....

Description E-value Query
Range
Subject
Range
gi|6587811, gi|2... - gi|6587811|gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from this gene. [Arabidopsis t...
297.0 [0..1] [214..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEAKEKKNP EISVSITIST WGAFAVYVIT GLFLIFGFHV VRNKYSVDLI SDPTLTLRLL  60
   61 WIIEFPIVVI IYSLFRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEKCSYFRA VGRSLVGLIA GALINALGAV SLGAPIGMQS LSKTIHWSFL MSVFTVVPAT  60
   61 AVLGASWIDW HRIFASLKPI GIIEHMLLVP AYGAIIGGWF GAWPMPLDWE RPWQEWPICV 120
  121 CYGAIGGYIG GQMVSLLTLL SEHKNLKLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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