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View Structure Prediction Details

Protein: gi|26452553, gi|...
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26452553, gi|....

Description E-value Query
Range
Subject
Range
gi|2618690, gi|7... - pir||T00811 hypothetical protein At2g41550 [imported] - Arabidopsis thaliana, gi|2618690|gb|AAB84337...
825.0 [0..1] [475..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDDDLWGP PRVFVVVQDD TFRKQTVRRC EFWFDFRTDV LEENFQNEKY CELVWRILTE  60
   61 KKRQVTEIAE LERVSVSVSA QNDTASSGSG GDLHEIDSSD SDKTLSTTLP DSDTSSAKLA 120
  121 LDDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.832 a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #2
Region A:
Residues: [125-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENTSSISDAQ TAQTVQIRDS SNDDTEDIEP ETRLMPHETA ANDPLTVEVA EDADTSSSPV  60
   61 LESKIDEAEE HSCSSLVTDQ VFDPIKQALE NKSSSAISRE SIGGSTLRPL HLETREKANT 120
  121 TDEDGDILKD HQQNDSLQDI VTVSEPFTTE SLLEMCDEPD KGRDIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [291-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CGERSKKSHP EAVVKTVVKD ELIISLLTEA RKKAESKNPG SVLIKKRQRQ SNSSDNKGAN  60
   61 TSFIRNIKQK VQGGAGEINI DPVKNSTQS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [380-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPKIIRGSSV PTQHADSLLD SSMDGKIQRG GKNVSGSLIS LSISELKKKT GKELRSIAKD  60
   61 LKVQHYYKLK KEDLLQRITN QLNPQLADCT KQRMES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle