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View Structure Prediction Details

Protein: gi|28827308, gi|...
Organism: Arabidopsis thaliana
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28827308, gi|....

Description E-value Query
Range
Subject
Range
gi|21555290 - gi|21555290|gb|AAM63825.1| unknown [Arabidopsis thaliana]
240.0 [0..6] [163..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQREMAKMV VLSAMMILIL ASTISAKEQL STKECEDLGF SGLALCSDCH SLSEYVKDQE  60
   61 LVSDCLKCCA DDSEDSMSKV TYSGAILEVC MRKLVFYPEI VGFIEEEKEK FPSVKVQYIF 120
  121 NSPPKLIMLD EDGEHKESIR IDNWKREHLL QYMREKVKPT AAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 2a4hA
Description: Solution structure of Sep15 from Drosophila melanogaster
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle