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View Structure Prediction Details

Protein: TPS5_ARATH
Organism: Arabidopsis thaliana
Length: 862 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TPS5_ARATH.

Predicted Domain #1
Region A:
Residues: [1-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRSYSNLL DLASGNFHSF SREKKRFPRV ATVTGVLSEL DDDNNSNSVC SDAPSSVTQD  60
   61 RIIIVGNQLP IKSHRNSAGK LSFSWDNDSL LLQLKDGMRE DMEVVYIGCL KEQIDTVEQD 120
  121 DVSQRLLENF KCVPAYIPPE LFTKYYHGFC KQHLWPLFHY MLPLTPDLGG RFDRSLWQAY 180
  181 LSVNKIFADK VMEVISPDDD FVWVHDYHLM VLPTFLRKRF NRVKLGFFLH SPFPSSEIYR 240
  241 TLPVRNELLR ALLNADLIGF HTFDYARHFL SCCSRMLGLS YQSKRGTIGL EYYGRTVSIK 300
  301 ILPVGIHISQ LQSILNLPET QTKVAELRDQ FLDQKVLLGV DDMDIFKGIS LKLLAMEQLL 360
  361 TQHPEKRGRV VLVQIANPAR GRGKDVQEVQ SETEATVKRI NEMFGRPGYQ PVVLIDTPLQ 420
  421 FFERIAYYVI AECCLVTAVR DGMNLIPYEY IICRQGNPKL NETIGLDPSA AKKSMLVVSE 480
  481 FIGCSPSLSG AIRVNPWNID AVTEAMDYAL IVSEAEKQMR HEKHHKYVST HDVAYWARSF 540
  541 IQDLERACGD H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.0
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [552-862]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRKRCWGIGF GLGFRVVALD PSFKKLSIEH IVSAYKRTKN RAILLDYDGT MVQPGSIRTT  60
   61 PTRETIEILN NLSSDPKNIV YLVSGKDRRT LTEWFSSCDD LGLGAEHGYF IRPNDGTDWE 120
  121 TSSLVSGFEW KQIAEPVMRL YTETTDGSTI ETKETALVWN YQFADPDFGS CQAKELMEHL 180
  181 ESVLTNDPVS VKTGQQLVEV KPQGVNKGLV AERLLTTMQE KGKLLDFILC VGDDRSDEDM 240
  241 FEVIMSAKDG PALSPVAEIF ACTVGQKPSK AKYYLDDTAE IIRMLDGLAA TNTTISDQTD 300
  301 STATVPTKDL F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.045757
Match: 1u02A
Description: Crystal structure of trehalose-6-phosphate phosphatase related protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle