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View Structure Prediction Details

Protein: ARC2A_ARATH
Organism: Arabidopsis thaliana
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARC2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|114583269 - gi|114583269|ref|XP_516084.2| PREDICTED: actin related protein 2/3 complex subunit 2 isoform 7 [Pan ...
477.0 [0..1] [317..1]

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Predicted Domain #1
Region A:
Residues: [1-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLQSHSRF LLQTLLTRAQ NLDKAVELDY QWIEFDDVRY HVQVTMKNPN LLLLSVSLPN  60
   61 PPPEAMSFDG LPLGAIEAIK TTYGTGFQIL DPPRDGFSLT LKLNFSKVRP DEELLTKLAS 120
  121 IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS 180
  181 VDTILATSFL KEFVEARRAA ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR 240
  241 HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN 300
  301 NKSFKRLGLN EVNHTNSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 130.0
Match: 1k8kD
Description: ARPC2 (34 kDa subunit)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
actin binding 6.0922573068519 bayes_pls_golite062009
actin filament binding 5.01990273175321 bayes_pls_golite062009
cytoskeletal protein binding 4.64781612293343 bayes_pls_golite062009
protein binding 1.98253629760139 bayes_pls_golite062009
binding 1.73154686605711 bayes_pls_golite062009
structural molecule activity 1.40122171600941 bayes_pls_golite062009
structural constituent of cytoskeleton 1.37010524302636 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle