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View Structure Prediction Details

Protein: gi|30684599, gi|...
Organism: Arabidopsis thaliana
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30684599, gi|....

Description E-value Query
Range
Subject
Range
gi|7268692, gi|2... - pir||T05035 hypothetical protein F13C5.150 - Arabidopsis thaliana, gi|7268692|emb|CAB78900.1| hypoth...
151.0 [0..1] [106..23]
gi|92872265 - gi|92872265|gb|ABE80969.1| Protein of unknown function DUF584 [Medicago truncatula]
110.0 [0..4] [105..34]
gi|50926536, gi|... - gi|50926536|ref|XP_473215.1| OSJNBa0019D11.12 [Oryza sativa (japonica cultivar-group)], gi|21741857|...
gi|116310726 - gi|116310726|emb|CAH67522.1| OSIGBa0131L05.3 [Oryza sativa (indica cultivar-group)]
109.0 [0..2] [105..33]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEFQESEV IFSDESFTRK DNKISHNNEN YERKSTEKDK ISSPVRIPSR TTIRYTEEEG  60
   61 EMTPPHVIIE KRRTEAQMAF SFCTLKGRDL SRHRNTVLRM TGFLEV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 49.853872
Match: PF04520.4
Description: No description for PF04520.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.789 N/A N/A a.1.1 Globin-like
View Download 0.789 N/A N/A a.1.1 Globin-like
View Download 0.781 N/A N/A a.1.1 Globin-like
View Download 0.641 N/A N/A a.1.1 Globin-like
View Download 0.451 N/A N/A a.1.1 Globin-like
View Download 0.451 N/A N/A a.1.1 Globin-like
View Download 0.316 N/A N/A a.1.1 Globin-like
View Download 0.310 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.310 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.257 N/A N/A d.52.8 Description not found.
View Download 0.243 N/A N/A a.133.1 Phospholipase A2, PLA2


YRC Informatics Platform - Version 3.0
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