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View Structure Prediction Details

Protein: DTX2_ARATH
Organism: Arabidopsis thaliana
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
331.0 [0..2] [475..622]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPFLPRDE QLVSCKSTWQ SGQVTVELKK VSRLAAPMAT VTIAQYLLPV ISVMVAGHIG  60
   61 ELELAGVALA TSFTNVSGFS IMFGLVGALE TLCGQAYGAE QYEKIGTYTY SAMASNIPIC 120
  121 FIISILWIYI EKLLITLGQE PDISRVAGSY SLWLVPALFA HAIFLPLTRF LLAQGLVISL 180
  181 LYSAMTTLLF HIAVCWTLVF ALGLGSNGAA IAISLSFWFY AVILSCHVRF FSSCEK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.769551
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRGFVSNDFM SSIKQYFQYG VPSAGLICLE WWLFELLILC SGLLPNPKLE TSVLSICLTI  60
   61 GTLHYVIPSG VAAAVSTRVS NKLGAGNPQV ARVSVLAGLC LWLVESAFFS TLLFTCRNII 120
  121 GYTFSNSKEV VDYVADISPL LCLSFILDGL TAVLNGVARG CGWQHIGALI NVVAYYLVGA 180
  181 PVGVYLAFSR EWNGKGLWCG VMVGSAVQAT LLAIVTASMN WKEQAEKARK RIISTENGLV 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.823909
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle