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View Structure Prediction Details

Protein: SK2_ARATH
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SK2_ARATH.

Description E-value Query
Range
Subject
Range
gi|98660144 - gi|98660144|dbj|GAA02552.1| unnamed protein product [Pelotomaculum thermopropionicum SI]
195.0 [0..34] [299..155]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAATVQRFQ YSSWNDLRNF EGKPRGSLRY NTQRIKEDKR FRVVALTLDK RRDHRLRSVS  60
   61 DKNSSALLET GSLLHSPFDE EQQILKKKAE EVKPYLNGRS MYLVGMMGSG KTTVGKIMAR 120
  121 SLGYTFFDCD TLIEQAMKGT SVAEIFEHFG ESVFREKETE ALKKLSLMYH QVVVSTGGGA 180
  181 VIRPINWKYM HKGISIWLDV PLEALAHRIA AVGTGSRPLL HDDESGDTYT AALNRLSTIW 240
  241 DARGEAYTKA SARVSLENIT LKLGYRSVSD LTPAEIAIEA FEQVQSYLEK EDGMARPDGL 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle