| Protein: | NUP54_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP54_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..1] | [377..10] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MFGTPSSSPS FGTPSSTPAF GTSSPAFGTP SATPAFGTPS NPSFSSGGFG SSLFSSPFSS 60
61 QQPQQQQQQQ QQQQPSSLFQ QQPSSNFGFQ SPFNNTAQQQ QQTPFPNAQL TTQMAPVAPI 120
121 PYSLADRDVQ AIIEAYKEDP TNPKYAFQHL LFSVTEPQYR VKPAAVSDIM WAEAMSKLEG 180
181 MDS
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [184-377] |
1 11 21 31 41 51
| | | | | |
1 TERERLWPQL VQGFKDLSQR LKLQDEVLVS DRDRIKTTQS NVKMLQRHLQ ASTFPSIERL 60
61 RQKEQSLQRR MLRVMRIIEG LEGKGFRLPL TKGEAELSEK LTAITRQVKG PGAELSRRVQ 120
121 SLQTISRAQA NSIAAGSSLY LPGSTKIDEQ SLIDMQEVLQ QETEAIGRLG NVLKRDMRDM 180
181 EIMVAEDTEM ALDS
|
| Detection Method: | |
| Confidence: | 13.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
