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View Structure Prediction Details

Protein: P24D7_ARATH
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P24D7_ARATH.

Description E-value Query
Range
Subject
Range
gi|109066641, gi... - gi|109066643|ref|XP_001091631.1| PREDICTED: similar to transmembrane emp24 protein transport domain ...
243.0 [0..9] [212..16]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHRRSSIVL LILSILSPVT LSIRYELLSG HTKCISEEIH ANAMTIGKYS IINPHEDHPL  60
   61 PSSHKVTVRV TSPQGTAYHE SDGVESGQFS FVAVETGDYI SCFSAVDHKP ETTLIIDFDW 120
  121 RTGIHTKDWS NVAKKSQVET ME

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.481486
Match: PF01105.15
Description: No description for PF01105.15 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.784 N/A N/A d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.671 N/A N/A c.16.1 Lumazine synthase
View Download 0.656 N/A N/A b.1.1 Immunoglobulin
View Download 0.613 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.595 N/A N/A d.224.1 SufE-like

Predicted Domain #2
Region A:
Residues: [143-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FEVKKLFETV NGIHDEMFYL RDREEEMHNL NIATNSKMAW LSFVSLAVCL SVAGLQFWHL  60
   61 KTFFQKKKLI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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