| Protein: | Y2608_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 244 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2608_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..1] | [239..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA 60
61 ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS QSYVLTKGWS RYVKEKHLDA 120
121 GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQS
|
| Detection Method: |  |
| Confidence: | 32.522879 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [159-244] |
1 11 21 31 41 51
| | | | | |
1 NASLQYYPHA GAQAVESQRG NSKTLRLFGV NMECQLDSDW SEPSTPDGSN TYTTNHDQFH 60
61 FYPQQQHYPP PYYMDISFTG DMNRTS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.711 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.705 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.530 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.528 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.447 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.443 | N/A | N/A | d.300.1 | Description not found. |
| View | Download | 0.410 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.405 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.392 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.380 | N/A | N/A | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.293 | N/A | N/A | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.238 | N/A | N/A | b.113.1 | N-terminal domain of MutM-like DNA repair proteins |
