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View Structure Prediction Details

Protein: MP705_ARATH
Organism: Arabidopsis thaliana
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MP705_ARATH.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
277.0 [0..2] [510..2102]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAENPFVS DTSSLQSQLK EKEKELLAAK AEVEALRTNE ELKDRVFKEL RENVRKLEEK  60
   61 LGATENQVDQ KELERKKLEE EKEDALAAQD AAEEALRRVY THQQDDDSLP LESIIAPLES 120
  121 QIKIHK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.65
Match: 1jchA
Description: Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [127-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEISALQEDK KALERLTKSK ESALLEAERI LRSALERALI VEEVQNHNFE LRRQIEICQD  60
   61 ENKFLEKINR QKVLEIEKLS QSIVELEEAI LAGGTAANAV RDYRRQISQL NDEKRTLERE 120
  121 LARVKVSASR VALAVANEWK DENDRVMPVK QWLEERRILH GEMQKLKDKL AVSERTAKAE 180
  181 SQLKERLKLR LKTIEDGLKG PNTFFVSPTT KTEKSGKILG FLTSGGGSKK RSSSQLRGSV 240
  241 TGRIHAMNQP IDRVGESDEM ENSKITANGL TDQHEEDSER KTEEDGNVYS EDMVSGFLYD 300
  301 RLQKEVIALR KLCESKEGTI NAKNEEIKML LKKVDALTKA IEVETKKAKR EAAAREKENA 360
  361 LAMLNEESKL CRKAKLPRSR IPNPRCQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle